Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Gm27320-201ENSMUST00000184892 109 ntBASIC12.39□□□□□ -0.43
Ssr1Q9CY50 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Gm17812-201ENSMUST00000204935 318 ntBASIC12.39□□□□□ -0.43
Ssr1Q9CY50 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.39□□□□□ -0.43
Ssr1Q9CY50 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ssr1Q9CY50 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm38910-201ENSMUST00000204630 2448 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm26286-201ENSMUST00000104166 134 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm38317-201ENSMUST00000195564 343 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm43179-201ENSMUST00000198797 275 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm13097-201ENSMUST00000210722 397 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ssr1Q9CY50 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 CT009601.1-201ENSMUST00000225567 2705 ntBASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm15198-201ENSMUST00000117283 177 ntBASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm26361-201ENSMUST00000158868 186 ntBASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm29615-201ENSMUST00000185371 697 ntBASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm28224-201ENSMUST00000186078 697 ntBASIC12.37□□□□□ -0.43
Ssr1Q9CY50 Gm29001-201ENSMUST00000186177 697 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms