Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm12501-201ENSMUST00000119163 529 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm11450-201ENSMUST00000121144 333 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm8100-201ENSMUST00000182906 988 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm2965-201ENSMUST00000198365 343 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm19208-201ENSMUST00000213861 912 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm5369-201ENSMUST00000217499 588 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.13□□□□□ -0.63
Trim16Q99PP9 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.13□□□□□ -0.63
Trim16Q99PP9 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm13035-201ENSMUST00000117496 342 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm4482-201ENSMUST00000200876 742 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm6450-201ENSMUST00000200896 574 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm7848-201ENSMUST00000210739 718 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.12□□□□□ -0.63
Trim16Q99PP9 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trim16Q99PP9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Gm15207-201ENSMUST00000119259 442 ntBASIC11.11□□□□□ -0.63
Trim16Q99PP9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trim16Q99PP9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms