Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm11663-201ENSMUST00000117888 290 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm44262-201ENSMUST00000204969 372 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.69□□□□□ -0.7
Nkd1Q99MH6 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkd1Q99MH6 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm13996-201ENSMUST00000118456 430 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm25668-201ENSMUST00000157700 129 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm25890-201ENSMUST00000177643 165 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm22614-201ENSMUST00000178300 165 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm43630-201ENSMUST00000201550 776 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm44008-201ENSMUST00000204345 412 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 Gm7783-201ENSMUST00000204795 781 ntBASIC10.68□□□□□ -0.7
Nkd1Q99MH6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkd1Q99MH6 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms