Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm24954-201ENSMUST00000178831 110 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm20781-201ENSMUST00000193154 693 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm21736-201ENSMUST00000195399 693 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.02□□□□□ -0.49
Clp1Q99LI9 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.02□□□□□ -0.49
Clp1Q99LI9 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clp1Q99LI9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm13094-201ENSMUST00000117930 409 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm1826-201ENSMUST00000118646 1162 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm15617-201ENSMUST00000118973 771 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm4917-201ENSMUST00000121452 650 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm23675-201ENSMUST00000157311 125 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm37197-201ENSMUST00000195607 401 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm43854-201ENSMUST00000200418 394 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clp1Q99LI9 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.01□□□□□ -0.49
Clp1Q99LI9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clp1Q99LI9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm37472-201ENSMUST00000192342 4052 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm11952-201ENSMUST00000121172 821 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm3329-201ENSMUST00000159873 556 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Gm16165-201ENSMUST00000160140 795 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm26119-201ENSMUST00000175601 104 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm29164-201ENSMUST00000185454 1024 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Gm6606-201ENSMUST00000193613 947 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Gm42751-201ENSMUST00000198065 559 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clp1Q99LI9 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12□□□□□ -0.49
Clp1Q99LI9 CT025689.1-201ENSMUST00000225214 283 ntBASIC12□□□□□ -0.49
Clp1Q99LI9 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms