Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm22323-201ENSMUST00000103832 109 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm24255-201ENSMUST00000104481 128 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm11222-201ENSMUST00000119005 738 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm14381-201ENSMUST00000122105 414 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm5392-201ENSMUST00000122189 789 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm12591-201ENSMUST00000122407 1177 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm4857-201ENSMUST00000192718 785 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm38092-201ENSMUST00000195600 653 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm34701-201ENSMUST00000204213 849 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 AC173482.2-201ENSMUST00000224044 750 ntBASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr855-201ENSMUST00000061693 992 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb3Q91XZ7 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm13924-201ENSMUST00000119899 486 ntBASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm11964-201ENSMUST00000120982 444 ntBASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm43491-201ENSMUST00000197133 784 ntBASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 AC117949.2-201ENSMUST00000225900 584 ntBASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb3Q91XZ7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms