Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trex1Q91XB0 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trex1Q91XB0 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm4917-201ENSMUST00000121452 650 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm11354-201ENSMUST00000121974 422 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm15620-201ENSMUST00000122949 270 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm20414-201ENSMUST00000172918 646 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Snord55-201ENSMUST00000174939 79 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm43778-201ENSMUST00000199438 199 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm43249-201ENSMUST00000200464 458 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm18035-201ENSMUST00000211962 589 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trex1Q91XB0 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.97□□□□□ -0.33
Trex1Q91XB0 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Btrc-209ENSMUST00000224478 2194 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gm15036-201ENSMUST00000118880 400 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gm11979-201ENSMUST00000119629 743 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gm12453-201ENSMUST00000121981 331 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Mir6941-201ENSMUST00000184711 59 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gm5870-201ENSMUST00000196461 282 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.96□□□□□ -0.33
Trex1Q91XB0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trex1Q91XB0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trex1Q91XB0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trex1Q91XB0 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trex1Q91XB0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trex1Q91XB0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms