Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm7399-201ENSMUST00000032395 858 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm8752-201ENSMUST00000173427 1694 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Gm42853-201ENSMUST00000201273 1387 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 AC117656.2-201ENSMUST00000224931 2215 ntBASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Pcdh18Q8VHR0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm12015-201ENSMUST00000117065 843 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm11930-201ENSMUST00000117788 190 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm12164-201ENSMUST00000121695 551 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm5070-201ENSMUST00000177599 862 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm43002-201ENSMUST00000200310 155 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 AC159896.2-201ENSMUST00000214753 269 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Susd2-202ENSMUST00000095541 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Pcdh18Q8VHR0 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Pcdh18Q8VHR0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms