Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.85□□□□□ -0.03
Ddx54Q8K4L0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm6441-201ENSMUST00000120983 696 ntBASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm27316-201ENSMUST00000184884 277 ntBASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm8643-201ENSMUST00000195228 625 ntBASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 BB187690-201ENSMUST00000198619 1176 ntBASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm44605-201ENSMUST00000206892 949 ntBASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gm6653-201ENSMUST00000218063 1288 ntBASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ddx54Q8K4L0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ddx54Q8K4L0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx54Q8K4L0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ddx54Q8K4L0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Ddx54Q8K4L0 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.83□□□□□ -0.03
Ddx54Q8K4L0 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Gm6754-201ENSMUST00000117124 913 ntBASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Gm19246-201ENSMUST00000173599 255 ntBASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Gm37858-201ENSMUST00000192759 1231 ntBASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Gm29689-201ENSMUST00000221076 589 ntBASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ddx54Q8K4L0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm38314-201ENSMUST00000195709 625 ntBASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm6352-201ENSMUST00000203583 1134 ntBASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm44420-201ENSMUST00000203669 490 ntBASIC14.82□□□□□ -0.04
Ddx54Q8K4L0 Gm44008-201ENSMUST00000204345 412 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms