Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm15352-201ENSMUST00000118696 270 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm15549-201ENSMUST00000121595 622 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm9089-201ENSMUST00000122027 526 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Mir6979-201ENSMUST00000183927 56 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm45856-201ENSMUST00000212752 416 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Clrn1Q8K445 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.7□□□□□ -0.7
Clrn1Q8K445 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm22711-201ENSMUST00000116890 133 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm6335-201ENSMUST00000118081 1194 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm13611-201ENSMUST00000118269 318 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm15573-201ENSMUST00000119487 540 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm11331-201ENSMUST00000119764 288 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm7816-201ENSMUST00000119884 1194 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm11836-201ENSMUST00000121022 441 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm15542-201ENSMUST00000121585 1194 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm4726-201ENSMUST00000135604 736 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm6019-201ENSMUST00000148369 736 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.69□□□□□ -0.7
Clrn1Q8K445 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms