Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc87Q8CDL9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Gm4909-201ENSMUST00000118749 794 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Gm15711-201ENSMUST00000118889 535 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Gm17827-201ENSMUST00000211825 742 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Gm5705-201ENSMUST00000066241 711 ntBASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc87Q8CDL9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 CT010447.1-201ENSMUST00000225657 1608 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm23949-201ENSMUST00000104027 127 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm14071-201ENSMUST00000117817 509 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Mir7070-201ENSMUST00000183657 86 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.05□□□□□ -0.48
Ccdc87Q8CDL9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms