Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm26875-201ENSMUST00000181006 950 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm28032-201ENSMUST00000184104 96 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm38233-201ENSMUST00000194259 807 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 BX649293.1-201ENSMUST00000227437 631 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col16a1Q8BLX7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm8968-201ENSMUST00000199133 1303 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm6216-201ENSMUST00000182390 687 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm43106-201ENSMUST00000199485 637 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Ighv1-86-201ENSMUST00000200562 353 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm29689-201ENSMUST00000221076 589 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm13608-201ENSMUST00000121807 1406 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm12470-201ENSMUST00000117239 1049 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm16288-201ENSMUST00000137940 367 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm16228-201ENSMUST00000162286 809 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm43866-201ENSMUST00000203894 839 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm5738-201ENSMUST00000206016 779 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 AC133517.1-201ENSMUST00000225825 594 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Gm10238-201ENSMUST00000089689 408 ntBASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col16a1Q8BLX7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm5510-201ENSMUST00000117826 486 ntBASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm24346-201ENSMUST00000158712 194 ntBASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm20694-201ENSMUST00000176943 404 ntBASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm7833-201ENSMUST00000183288 990 ntBASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm37858-201ENSMUST00000192759 1231 ntBASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 AC241616.1-201ENSMUST00000213741 166 ntBASIC14.63□□□□□ -0.07
Col16a1Q8BLX7 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms