Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Chmp2bQ8BJF9 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm14723-201ENSMUST00000118686 215 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm26361-201ENSMUST00000158868 186 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm20495-201ENSMUST00000173902 235 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm43822-201ENSMUST00000200285 476 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm26448-201ENSMUST00000082446 203 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Chmp2bQ8BJF9 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm12463-201ENSMUST00000118271 849 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm11783-201ENSMUST00000119549 885 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm44008-201ENSMUST00000204345 412 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm44262-201ENSMUST00000204969 372 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Chmp2bQ8BJF9 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms