Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pcdh19Q80TF3 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pcdh19Q80TF3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm12813-201ENSMUST00000119615 902 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm12899-201ENSMUST00000120565 551 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm38210-201ENSMUST00000191944 809 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm37905-201ENSMUST00000195310 341 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdh19Q80TF3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm12274-201ENSMUST00000120062 385 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdh19Q80TF3 Gm26134-201ENSMUST00000178484 110 ntBASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms