Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Mir744-201ENSMUST00000103261 100 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm15003-201ENSMUST00000118884 446 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm8815-201ENSMUST00000173809 620 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 BC106175-202ENSMUST00000219344 1213 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Prpf38bQ80SY5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm25766-201ENSMUST00000104101 131 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm6098-201ENSMUST00000180234 330 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm5599-201ENSMUST00000209602 788 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.03□□□□□ -0.48
Prpf38bQ80SY5 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms