Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ctdp1Q7TSG2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm37031-201ENSMUST00000195487 2530 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm2260-201ENSMUST00000184965 657 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm18065-201ENSMUST00000221395 526 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ctdp1Q7TSG2 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ctdp1Q7TSG2 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ctdp1Q7TSG2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms