Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Snrnp40Q6PE01 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm24279-201ENSMUST00000104236 131 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm13094-201ENSMUST00000117930 409 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm25569-201ENSMUST00000157175 131 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Mir432-201ENSMUST00000157230 75 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm27390-201ENSMUST00000184516 176 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm37197-201ENSMUST00000195607 401 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm5178-201ENSMUST00000219380 898 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 AC164556.1-201ENSMUST00000221318 751 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Snrnp40Q6PE01 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm26616-202ENSMUST00000195676 3107 ntBASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm24954-201ENSMUST00000178831 110 ntBASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm42751-201ENSMUST00000198065 559 ntBASIC10□□□□□ -0.81
Snrnp40Q6PE01 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 AC129975.1-201ENSMUST00000224816 592 ntBASIC10□□□□□ -0.81
Snrnp40Q6PE01 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm10020-201ENSMUST00000081993 612 ntBASIC10□□□□□ -0.81
Snrnp40Q6PE01 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Gm15519-201ENSMUST00000120088 1566 ntBASIC10□□□□□ -0.81
Snrnp40Q6PE01 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms