Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm23132-201ENSMUST00000104254 132 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm6158-201ENSMUST00000109467 904 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm25569-201ENSMUST00000157175 131 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm4903-201ENSMUST00000210462 405 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccdc85bQ6PDY0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm11475-201ENSMUST00000118482 476 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm8019-201ENSMUST00000119317 587 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm15136-201ENSMUST00000120552 533 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm13899-201ENSMUST00000121519 1255 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm4943-201ENSMUST00000132879 424 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm7765-201ENSMUST00000182585 974 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm38007-201ENSMUST00000192187 313 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm7525-201ENSMUST00000219425 454 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ccdc85bQ6PDY0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc85bQ6PDY0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ccdc85bQ6PDY0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ccdc85bQ6PDY0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.9□□□□□ -0.51
Ccdc85bQ6PDY0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ccdc85bQ6PDY0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms