Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Thsd7b-201ENSMUST00000040311 3895 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.75□□□□□ -0.69
Rnf220Q6PDX6 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Defa-ps4-201ENSMUST00000118021 183 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm25116-201ENSMUST00000157191 122 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm13140-201ENSMUST00000119840 3151 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rnf220Q6PDX6 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm13316-201ENSMUST00000140537 691 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm27514-201ENSMUST00000183692 110 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm18711-201ENSMUST00000199341 750 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.73□□□□□ -0.69
Rnf220Q6PDX6 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms