Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm42971-201ENSMUST00000199228 2079 ntBASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm5526-201ENSMUST00000153604 423 ntBASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm9619-201ENSMUST00000211587 762 ntBASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 CT025603.1-201ENSMUST00000224040 448 ntBASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chd4Q6PDQ2 Gm8873-201ENSMUST00000217847 1439 ntBASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Gm27826-201ENSMUST00000175282 255 ntBASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Mipep-ps-201ENSMUST00000177439 291 ntBASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd4Q6PDQ2 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Mir1941-201ENSMUST00000157834 83 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Trav11n-201ENSMUST00000200113 343 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm44420-201ENSMUST00000203669 490 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 CT010505.2-201ENSMUST00000227918 998 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm12947-201ENSMUST00000116114 420 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm16441-201ENSMUST00000138176 924 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm6038-201ENSMUST00000154310 948 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm11942-201ENSMUST00000180255 345 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Gm9204-201ENSMUST00000212641 947 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC14.54□□□□□ -0.08
Chd4Q6PDQ2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms