Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Slx4Q6P1D7 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC17.22■□□□□ 0.35
Slx4Q6P1D7 Paupar-201ENSMUST00000194826 3482 ntBASIC17.22■□□□□ 0.35
Slx4Q6P1D7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Gm5472-201ENSMUST00000178604 1678 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Gm13426-201ENSMUST00000117887 795 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Gm12736-201ENSMUST00000119330 236 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Gm45745-201ENSMUST00000211447 1180 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 AC102569.1-201ENSMUST00000221563 685 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 AC163638.2-201ENSMUST00000224920 827 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Gm8420-201ENSMUST00000097103 598 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slx4Q6P1D7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC17.21■□□□□ 0.35
Slx4Q6P1D7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slx4Q6P1D7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Gm14148-201ENSMUST00000122433 1008 ntBASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Gm7211-201ENSMUST00000172692 1118 ntBASIC17.2■□□□□ 0.34
Slx4Q6P1D7 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Gm9619-201ENSMUST00000211587 762 ntBASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Gm18806-201ENSMUST00000207607 1775 ntBASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slx4Q6P1D7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm17782-201ENSMUST00000174345 880 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Mir8111-201ENSMUST00000184463 137 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm38349-201ENSMUST00000195732 462 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm14592-201ENSMUST00000117201 560 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm43117-201ENSMUST00000198531 379 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 AC154585.1-201ENSMUST00000218917 997 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Gm25514-201ENSMUST00000083860 135 ntBASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slx4Q6P1D7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC17.18■□□□□ 0.34
Slx4Q6P1D7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms