Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Krt39Q6IFX4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm12380-201ENSMUST00000119012 544 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm14277-201ENSMUST00000121195 360 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm2260-201ENSMUST00000184965 657 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm7003-201ENSMUST00000195089 312 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm5714-201ENSMUST00000197343 566 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Krt39Q6IFX4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm23596-201ENSMUST00000104304 132 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm15711-201ENSMUST00000118889 535 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm12997-201ENSMUST00000120207 640 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm24749-201ENSMUST00000157838 343 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm8459-201ENSMUST00000162504 760 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Mir7677-201ENSMUST00000184226 67 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms