Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Ift88Q61371 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ift88Q61371 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.54□□□□□ -0.4
Ift88Q61371 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ift88Q61371 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ift88Q61371 Gm37954-201ENSMUST00000195400 2071 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm8459-201ENSMUST00000162504 760 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Gm27320-201ENSMUST00000184892 109 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.53□□□□□ -0.4
Ift88Q61371 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.53□□□□□ -0.4
Ift88Q61371 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ift88Q61371 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.53□□□□□ -0.4
Ift88Q61371 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ift88Q61371 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ift88Q61371 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ift88Q61371 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.52□□□□□ -0.4
Ift88Q61371 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ift88Q61371 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ift88Q61371 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ift88Q61371 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ift88Q61371 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ift88Q61371 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ift88Q61371 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Ift88Q61371 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ift88Q61371 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.52□□□□□ -0.41
Ift88Q61371 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.52□□□□□ -0.41
Ift88Q61371 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.52□□□□□ -0.41
Ift88Q61371 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Gm16505-201ENSMUST00000179981 232 ntBASIC12.52□□□□□ -0.41
Ift88Q61371 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.52□□□□□ -0.41
Ift88Q61371 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms