Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm4310-201ENSMUST00000177847 889 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm6621-201ENSMUST00000193251 772 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm9368-201ENSMUST00000219348 831 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.84□□□□□ -0.67
Nr1h4Q60641 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nr1h4Q60641 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nr1h4Q60641 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nr1h4Q60641 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Adcy6-205ENSMUST00000228566 3707 ntAPPRIS ALT1 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.83□□□□□ -0.68
Nr1h4Q60641 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm8062-201ENSMUST00000139696 444 ntBASIC10.83□□□□□ -0.68
Nr1h4Q60641 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm2991-201ENSMUST00000173338 480 ntBASIC10.83□□□□□ -0.68
Nr1h4Q60641 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm27572-201ENSMUST00000183702 255 ntBASIC10.83□□□□□ -0.68
Nr1h4Q60641 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Gm44008-201ENSMUST00000204345 412 ntBASIC10.83□□□□□ -0.68
Nr1h4Q60641 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.83□□□□□ -0.68
Nr1h4Q60641 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nr1h4Q60641 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Nr1h4Q60641 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms