Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Trav5d-4Q5R1F6 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm12247-201ENSMUST00000117585 670 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm7857-201ENSMUST00000117957 358 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm38319-201ENSMUST00000194537 1266 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm6905-201ENSMUST00000205729 511 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav5d-4Q5R1F6 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav5d-4Q5R1F6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms