Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Lect2-202ENSMUST00000225183 823 ntBASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Syne3Q4FZC9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Mir6979-201ENSMUST00000183927 56 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm10774-201ENSMUST00000188689 204 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Ginm1-202ENSMUST00000065124 300 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Syne3Q4FZC9 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm11331-201ENSMUST00000119764 288 ntBASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.06□□□□□ -0.48
Syne3Q4FZC9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms