Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm4294-201ENSMUST00000105169 614 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm24990-201ENSMUST00000157406 323 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.91□□□□□ -0.34
Gm28047Q3US59 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.91□□□□□ -0.34
Gm28047Q3US59 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Gm28047Q3US59 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.9□□□□□ -0.34
Gm28047Q3US59 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm22920-201ENSMUST00000102175 109 ntBASIC12.9□□□□□ -0.34
Gm28047Q3US59 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm7741-201ENSMUST00000181445 989 ntBASIC12.9□□□□□ -0.34
Gm28047Q3US59 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.9□□□□□ -0.34
Gm28047Q3US59 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Gm28047Q3US59 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Gm28047Q3US59 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.9□□□□□ -0.35
Gm28047Q3US59 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Gm28047Q3US59 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Gm28047Q3US59 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Gm28047Q3US59 Snord17-201ENSMUST00000104526 238 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms