Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Spg11Q3UHA3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm3355-201ENSMUST00000160079 487 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm28746-201ENSMUST00000187453 380 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm18783-201ENSMUST00000220465 1151 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 AC114585.2-201ENSMUST00000227693 486 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 AC166491.1-201ENSMUST00000227053 2308 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm8661-201ENSMUST00000118688 992 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 H2-Pb-201ENSMUST00000172731 531 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm19246-201ENSMUST00000173599 255 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm34248-201ENSMUST00000200027 474 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm9353-201ENSMUST00000200472 604 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm45308-201ENSMUST00000210610 415 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm8170-201ENSMUST00000218581 945 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Gm9790-201ENSMUST00000054148 288 ntBASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Spg11Q3UHA3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm12796-201ENSMUST00000131864 344 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm23916-201ENSMUST00000158484 399 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm17797-201ENSMUST00000182175 997 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm44498-201ENSMUST00000199509 111 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Spg11Q3UHA3 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms