Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm11401-201ENSMUST00000117212 344 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm4908-201ENSMUST00000121923 1005 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm43097-201ENSMUST00000196867 151 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 AC160635.1-201ENSMUST00000216731 474 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm6653-201ENSMUST00000218063 1288 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm25842-201ENSMUST00000122590 322 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Gm29434-201ENSMUST00000187426 260 ntBASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ush2AQ2QI47 Sorbs3-204ENSMUST00000227929 2460 ntBASIC5.77□□□□□ -1.48
Ush2AQ2QI47 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC5.77□□□□□ -1.48
Ush2AQ2QI47 Gm9583-201ENSMUST00000219613 1843 ntBASIC5.77□□□□□ -1.48
Ush2AQ2QI47 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
Ush2AQ2QI47 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gskip-201ENSMUST00000051934 2720 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 CT010447.1-201ENSMUST00000225657 1608 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Rufy3-202ENSMUST00000196686 2077 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm28323-201ENSMUST00000186817 2499 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm37861-201ENSMUST00000193534 2869 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm42851-201ENSMUST00000201325 1411 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm4772-201ENSMUST00000122221 843 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ctdp1-203ENSMUST00000161003 1199 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm45756-201ENSMUST00000212491 407 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 AC107453.3-201ENSMUST00000228205 639 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Dppa5a-201ENSMUST00000071991 619 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 AC154640.1-203ENSMUST00000228316 1618 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm6124-201ENSMUST00000188240 2580 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm11800-201ENSMUST00000120050 579 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm14830-201ENSMUST00000121899 700 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Mir1893-201ENSMUST00000122565 83 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm17868-201ENSMUST00000192761 668 ntBASIC5.77□□□□□ -1.49
Ush2AQ2QI47 4933432K03Rik-202ENSMUST00000206244 765 ntTSL 3 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ush2AQ2QI47 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 127.2 ms