Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.12□□□□□ -0.47
Col19a1Q0VF58 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm16165-201ENSMUST00000160140 795 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm5873-201ENSMUST00000177157 1066 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm28671-201ENSMUST00000187036 692 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm44420-201ENSMUST00000203669 490 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Gm10238-201ENSMUST00000089689 408 ntBASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Col19a1Q0VF58 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm16441-201ENSMUST00000138176 924 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm20091-201ENSMUST00000179683 189 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Mir7088-201ENSMUST00000184227 86 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm7880-201ENSMUST00000203748 871 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm10020-201ENSMUST00000081993 612 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm22341-201ENSMUST00000083775 129 ntBASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col19a1Q0VF58 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms