Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Hoxc4Q08624 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxc4Q08624 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm12389-201ENSMUST00000117696 418 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm12628-201ENSMUST00000122193 382 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm23218-201ENSMUST00000158124 276 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm22877-201ENSMUST00000175451 105 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm19166-201ENSMUST00000196041 1063 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.91□□□□□ -0.66
Hoxc4Q08624 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hoxc4Q08624 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxc4Q08624 Snord23-201ENSMUST00000116828 109 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm11560-201ENSMUST00000117567 948 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm12663-201ENSMUST00000118481 958 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm12986-201ENSMUST00000119037 967 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm11952-201ENSMUST00000121172 821 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm13445-201ENSMUST00000121664 307 ntBASIC10.9□□□□□ -0.66
Hoxc4Q08624 Gm3828-201ENSMUST00000121817 257 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms