Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.28□□□□□ -0.44
Col9a2Q07643 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.28□□□□□ -0.44
Col9a2Q07643 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.28□□□□□ -0.44
Col9a2Q07643 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Gm14219-201ENSMUST00000120414 288 ntBASIC12.28□□□□□ -0.44
Col9a2Q07643 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Gm7719-201ENSMUST00000182374 975 ntBASIC12.28□□□□□ -0.44
Col9a2Q07643 Mir7035-201ENSMUST00000184713 82 ntBASIC12.28□□□□□ -0.44
Col9a2Q07643 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col9a2Q07643 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col9a2Q07643 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Col9a2Q07643 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.27□□□□□ -0.44
Col9a2Q07643 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.27□□□□□ -0.44
Col9a2Q07643 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.27□□□□□ -0.44
Col9a2Q07643 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col9a2Q07643 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm12663-201ENSMUST00000118481 958 ntBASIC12.27□□□□□ -0.45
Col9a2Q07643 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm26989-201ENSMUST00000182608 749 ntBASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm2594-201ENSMUST00000214774 742 ntBASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.27□□□□□ -0.45
Col9a2Q07643 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col9a2Q07643 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col9a2Q07643 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm13022-201ENSMUST00000121181 285 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm22442-201ENSMUST00000157256 144 ntBASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.26□□□□□ -0.45
Col9a2Q07643 Gm22877-201ENSMUST00000175451 105 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms