Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Cdx4Q07424 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC8.82□□□□□ -1
Cdx4Q07424 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC8.82□□□□□ -1
Cdx4Q07424 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Cdx4Q07424 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC8.81□□□□□ -1
Cdx4Q07424 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Cdx4Q07424 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC8.81□□□□□ -1
Cdx4Q07424 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Cdx4Q07424 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
Cdx4Q07424 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.81□□□□□ -1
Cdx4Q07424 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cdx4Q07424 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC8.81□□□□□ -1
Cdx4Q07424 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC8.81□□□□□ -1
Cdx4Q07424 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Gm7467-201ENSMUST00000185173 652 ntBASIC8.81□□□□□ -1
Cdx4Q07424 Gm37246-201ENSMUST00000192665 835 ntBASIC8.81□□□□□ -1
Cdx4Q07424 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.81□□□□□ -1
Cdx4Q07424 Gm42682-201ENSMUST00000198349 1265 ntBASIC8.81□□□□□ -1
Cdx4Q07424 AC153937.1-201ENSMUST00000218734 412 ntBASIC8.81□□□□□ -1
Cdx4Q07424 CT009713.8-201ENSMUST00000225448 560 ntBASIC8.81□□□□□ -1
Cdx4Q07424 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Cdx4Q07424 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Cdx4Q07424 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm43963-201ENSMUST00000203466 2488 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Gm9072-201ENSMUST00000218390 1514 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.8□□□□□ -1
Cdx4Q07424 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm37806-201ENSMUST00000194524 6387 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC8.8□□□□□ -1
Cdx4Q07424 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.8□□□□□ -1
Cdx4Q07424 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm8815-201ENSMUST00000173809 620 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Gm19459-201ENSMUST00000176240 835 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC8.8□□□□□ -1
Cdx4Q07424 Gm9555-201ENSMUST00000200908 583 ntBASIC8.8□□□□□ -1
Cdx4Q07424 AC141438.2-201ENSMUST00000215068 271 ntBASIC8.8□□□□□ -1
Cdx4Q07424 AC134860.1-201ENSMUST00000224867 660 ntBASIC8.8□□□□□ -1
Cdx4Q07424 AC154276.3-201ENSMUST00000227643 998 ntBASIC8.8□□□□□ -1
Cdx4Q07424 AC135114.1-201ENSMUST00000228682 270 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Ginm1-202ENSMUST00000065124 300 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm10702-201ENSMUST00000098929 1268 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Cdx4Q07424 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Gm43807-201ENSMUST00000200678 1781 ntBASIC8.8□□□□□ -1
Cdx4Q07424 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Cdx4Q07424 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms