Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.23□□□□□ -0.13
Smarcc1P97496 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.23□□□□□ -0.13
Smarcc1P97496 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.23□□□□□ -0.13
Smarcc1P97496 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Smarcc1P97496 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC14.23□□□□□ -0.13
Smarcc1P97496 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcc1P97496 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcc1P97496 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarcc1P97496 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcc1P97496 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm12337-201ENSMUST00000119634 400 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm9166-201ENSMUST00000120293 561 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm27390-201ENSMUST00000184516 176 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm8384-201ENSMUST00000190905 704 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm20781-201ENSMUST00000193154 693 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm21736-201ENSMUST00000195399 693 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC14.22□□□□□ -0.13
Smarcc1P97496 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.22□□□□□ -0.13
Smarcc1P97496 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarcc1P97496 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcc1P97496 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcc1P97496 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcc1P97496 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcc1P97496 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Matn2-203ENSMUST00000226766 3252 ntBASIC14.21□□□□□ -0.13
Smarcc1P97496 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.21□□□□□ -0.13
Smarcc1P97496 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Mir6953-201ENSMUST00000184745 68 ntBASIC14.21□□□□□ -0.13
Smarcc1P97496 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Gm7192-201ENSMUST00000210793 1137 ntBASIC14.21□□□□□ -0.13
Smarcc1P97496 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC14.21□□□□□ -0.13
Smarcc1P97496 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smarcc1P97496 AC105408.1-201ENSMUST00000227771 802 ntBASIC14.21□□□□□ -0.13
Smarcc1P97496 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smarcc1P97496 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcc1P97496 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms