Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.52□□□□□ -0.89
Npas1P97459 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Npas1P97459 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.52□□□□□ -0.89
Npas1P97459 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Npas1P97459 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.52□□□□□ -0.89
Npas1P97459 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Npas1P97459 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Npas1P97459 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Npas1P97459 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Npas1P97459 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.51□□□□□ -0.89
Npas1P97459 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Gm22018-201ENSMUST00000104357 131 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Gm6023-201ENSMUST00000118217 606 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.51□□□□□ -0.89
Npas1P97459 Gm11960-201ENSMUST00000122068 925 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Npas1P97459 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Gm38158-201ENSMUST00000194617 339 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Gm18893-201ENSMUST00000198416 943 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Gm6266-201ENSMUST00000203844 806 ntBASIC9.51□□□□□ -0.89
Npas1P97459 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Npas1P97459 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Gm4864-201ENSMUST00000219894 1461 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Dlgap2-208ENSMUST00000150247 3138 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Npas1P97459 Gm7103-201ENSMUST00000195642 1852 ntBASIC9.51□□□□□ -0.89
Npas1P97459 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Npas1P97459 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Npas1P97459 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Npas1P97459 AC123857.2-201ENSMUST00000225756 1582 ntBASIC9.5□□□□□ -0.89
Npas1P97459 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms