Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Gm6485-201ENSMUST00000160676 439 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SgcbP82349 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
SgcbP82349 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Gm3508-201ENSMUST00000186012 792 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Gm21139-201ENSMUST00000186594 877 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC10.2□□□□□ -0.78
SgcbP82349 Gm7504-201ENSMUST00000201449 424 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
SgcbP82349 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Gm45398-201ENSMUST00000210561 165 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.2□□□□□ -0.78
SgcbP82349 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.2□□□□□ -0.78
SgcbP82349 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SgcbP82349 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
SgcbP82349 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.2□□□□□ -0.78
SgcbP82349 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.2□□□□□ -0.78
SgcbP82349 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SgcbP82349 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SgcbP82349 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.19□□□□□ -0.78
SgcbP82349 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm14585-201ENSMUST00000120713 634 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.19□□□□□ -0.78
SgcbP82349 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.19□□□□□ -0.78
SgcbP82349 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm22334-201ENSMUST00000158070 133 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SgcbP82349 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
SgcbP82349 Gm18367-201ENSMUST00000176139 600 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.19□□□□□ -0.78
SgcbP82349 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.19□□□□□ -0.78
SgcbP82349 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.19□□□□□ -0.78
SgcbP82349 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Gm9645-201ENSMUST00000197131 792 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.19□□□□□ -0.78
SgcbP82349 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC10.19□□□□□ -0.78
SgcbP82349 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.19□□□□□ -0.78
SgcbP82349 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SgcbP82349 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.19□□□□□ -0.78
SgcbP82349 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.19□□□□□ -0.78
SgcbP82349 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.19□□□□□ -0.78
SgcbP82349 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms