Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm13284-201ENSMUST00000121020 547 ntBASIC12.31□□□□□ -0.44
CiitaP79621 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.31□□□□□ -0.44
CiitaP79621 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.31□□□□□ -0.44
CiitaP79621 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.31□□□□□ -0.44
CiitaP79621 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.31□□□□□ -0.44
CiitaP79621 Gm37028-201ENSMUST00000194276 107 ntBASIC12.31□□□□□ -0.44
CiitaP79621 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.31□□□□□ -0.44
CiitaP79621 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.31□□□□□ -0.44
CiitaP79621 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CiitaP79621 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CiitaP79621 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.31□□□□□ -0.44
CiitaP79621 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CiitaP79621 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.3□□□□□ -0.44
CiitaP79621 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.3□□□□□ -0.44
CiitaP79621 Gm28324-201ENSMUST00000187913 264 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.3□□□□□ -0.44
CiitaP79621 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.3□□□□□ -0.44
CiitaP79621 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.3□□□□□ -0.44
CiitaP79621 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CiitaP79621 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CiitaP79621 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CiitaP79621 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC12.29□□□□□ -0.44
CiitaP79621 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
CiitaP79621 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CiitaP79621 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.29□□□□□ -0.44
CiitaP79621 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CiitaP79621 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CiitaP79621 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Gm12030-201ENSMUST00000121917 223 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.29□□□□□ -0.44
CiitaP79621 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CiitaP79621 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Gm3726-201ENSMUST00000203110 785 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.29□□□□□ -0.44
CiitaP79621 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC12.29□□□□□ -0.44
CiitaP79621 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CiitaP79621 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Gm9139-201ENSMUST00000218817 700 ntBASIC12.29□□□□□ -0.44
CiitaP79621 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.29□□□□□ -0.44
CiitaP79621 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.29□□□□□ -0.44
CiitaP79621 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms