Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Cux2P70298 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC18.26■□□□□ 0.51
Cux2P70298 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cux2P70298 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cux2P70298 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC18.25■□□□□ 0.51
Cux2P70298 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Gm16480-201ENSMUST00000120439 832 ntBASIC18.25■□□□□ 0.51
Cux2P70298 Gm12136-201ENSMUST00000120460 1209 ntBASIC18.25■□□□□ 0.51
Cux2P70298 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Gm24346-201ENSMUST00000158712 194 ntBASIC18.25■□□□□ 0.51
Cux2P70298 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Gm20474-201ENSMUST00000180089 596 ntBASIC18.25■□□□□ 0.51
Cux2P70298 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Cux2P70298 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC18.25■□□□□ 0.51
Cux2P70298 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Gm8615-201ENSMUST00000025307 771 ntBASIC18.25■□□□□ 0.51
Cux2P70298 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC18.25■□□□□ 0.51
Cux2P70298 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Cux2P70298 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cux2P70298 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Gm7061-201ENSMUST00000118127 1416 ntBASIC18.24■□□□□ 0.51
Cux2P70298 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cux2P70298 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Gm12463-201ENSMUST00000118271 849 ntBASIC18.24■□□□□ 0.51
Cux2P70298 Gm40414-201ENSMUST00000197608 481 ntBASIC18.24■□□□□ 0.51
Cux2P70298 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC18.24■□□□□ 0.51
Cux2P70298 Gm5194-201ENSMUST00000221457 742 ntBASIC18.24■□□□□ 0.51
Cux2P70298 CT571271.1-201ENSMUST00000227071 670 ntBASIC18.24■□□□□ 0.51
Cux2P70298 Gm9790-201ENSMUST00000054148 288 ntBASIC18.24■□□□□ 0.51
Cux2P70298 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC18.24■□□□□ 0.51
Cux2P70298 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cux2P70298 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cux2P70298 Gm38111-201ENSMUST00000194817 2741 ntBASIC18.24■□□□□ 0.51
Cux2P70298 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Cux2P70298 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cux2P70298 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cux2P70298 Gm6517-201ENSMUST00000121056 511 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Gm8824-201ENSMUST00000182962 990 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Gm45308-201ENSMUST00000210610 415 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Atf7-201ENSMUST00000096143 390 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Gm20554-201ENSMUST00000177421 2352 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC18.23■□□□□ 0.51
Cux2P70298 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC18.23■□□□□ 0.51
Cux2P70298 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cux2P70298 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cux2P70298 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC18.23■□□□□ 0.51
Cux2P70298 Mir3100-201ENSMUST00000174918 65 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Gm18443-201ENSMUST00000185358 556 ntBASIC18.23■□□□□ 0.51
Cux2P70298 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC18.23■□□□□ 0.51
Cux2P70298 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC18.23■□□□□ 0.51
Cux2P70298 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cux2P70298 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Cux2P70298 Gm8684-201ENSMUST00000195078 1564 ntBASIC18.22■□□□□ 0.51
Cux2P70298 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Cux2P70298 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cux2P70298 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms