Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Pdlim4P70271 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Pdlim4P70271 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Pdlim4P70271 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.5□□□□□ -0.89
Pdlim4P70271 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Pdlim4P70271 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Pdlim4P70271 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm8731-201ENSMUST00000118088 412 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm19353-201ENSMUST00000184561 445 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Pdlim4P70271 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm7395-201ENSMUST00000216059 1045 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.49□□□□□ -0.89
Pdlim4P70271 AC153937.1-201ENSMUST00000218734 412 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Pdlim4P70271 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.49□□□□□ -0.89
Pdlim4P70271 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Pdlim4P70271 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Pdlim4P70271 AC167022.1-201ENSMUST00000218647 1458 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm11500-201ENSMUST00000118237 601 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm13611-201ENSMUST00000118269 318 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm23699-201ENSMUST00000158835 135 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm3150-201ENSMUST00000166418 204 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Nsd1-205ENSMUST00000224693 852 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.48□□□□□ -0.89
Pdlim4P70271 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Pdlim4P70271 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Pdlim4P70271 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms