Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Crnkl1P63154 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Crnkl1P63154 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Crnkl1P63154 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.25□□□□□ -0.61
Crnkl1P63154 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.25□□□□□ -0.61
Crnkl1P63154 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Crnkl1P63154 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm25043-201ENSMUST00000158604 212 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm20482-202ENSMUST00000174729 825 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm7584-201ENSMUST00000175829 940 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm6114-201ENSMUST00000182472 968 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.24□□□□□ -0.61
Crnkl1P63154 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.24□□□□□ -0.61
Crnkl1P63154 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.24□□□□□ -0.61
Crnkl1P63154 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.24□□□□□ -0.61
Crnkl1P63154 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Crnkl1P63154 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Crnkl1P63154 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm24255-201ENSMUST00000104481 128 ntBASIC11.23□□□□□ -0.61
Crnkl1P63154 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm15610-201ENSMUST00000120584 195 ntBASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.23□□□□□ -0.61
Crnkl1P63154 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.23□□□□□ -0.61
Crnkl1P63154 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Crnkl1P63154 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.23□□□□□ -0.61
Crnkl1P63154 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.23□□□□□ -0.61
Crnkl1P63154 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms