Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl39P62892 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Rpl39P62892 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm45161-201ENSMUST00000207316 2263 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 AC171277.1-201ENSMUST00000216902 1441 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm22018-201ENSMUST00000104357 131 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
Rpl39P62892 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC8.05□□□□□ -1.12
Rpl39P62892 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm5850-201ENSMUST00000192923 1206 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm6013-201ENSMUST00000212264 699 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm8712-201ENSMUST00000221090 701 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rpl39P62892 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 AC154528.2-201ENSMUST00000228432 3023 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Gm6831-202ENSMUST00000213025 1673 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Gm45041-201ENSMUST00000207366 3108 ntBASIC8.05□□□□□ -1.12
Rpl39P62892 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rpl39P62892 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm5846-201ENSMUST00000193146 1414 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Gm1840-201ENSMUST00000051687 1432 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm18210-201ENSMUST00000209001 1524 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm11660-201ENSMUST00000120955 412 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rpl39P62892 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC8.04□□□□□ -1.12
Rpl39P62892 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm5370-201ENSMUST00000187187 574 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm5982-201ENSMUST00000196234 512 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Igkv2-116-201ENSMUST00000199327 362 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Gm6266-201ENSMUST00000203844 806 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm7653-201ENSMUST00000214567 508 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Gm2553-201ENSMUST00000215986 605 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC8.04□□□□□ -1.12
Rpl39P62892 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rpl39P62892 Gm5455-201ENSMUST00000058710 715 ntBASIC8.04□□□□□ -1.12
Rpl39P62892 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rpl39P62892 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Rpl39P62892 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms