Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Lmo4P61969 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC9.16□□□□□ -0.94
Lmo4P61969 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Lmo4P61969 Gm14234-201ENSMUST00000119539 845 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Gm14213-201ENSMUST00000119778 768 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Gm14993-201ENSMUST00000121180 164 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Gm14165-201ENSMUST00000121456 952 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC9.16□□□□□ -0.94
Lmo4P61969 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Snord55-201ENSMUST00000174939 79 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Gm42660-201ENSMUST00000197733 947 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Gm44647-201ENSMUST00000207402 428 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.16□□□□□ -0.94
Lmo4P61969 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.16□□□□□ -0.94
Lmo4P61969 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.16□□□□□ -0.94
Lmo4P61969 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Lmo4P61969 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.15□□□□□ -0.94
Lmo4P61969 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.15□□□□□ -0.94
Lmo4P61969 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Lmo4P61969 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC9.15□□□□□ -0.94
Lmo4P61969 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm11952-201ENSMUST00000121172 821 ntBASIC9.15□□□□□ -0.94
Lmo4P61969 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Lmo4P61969 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC9.15□□□□□ -0.94
Lmo4P61969 Gm17889-201ENSMUST00000198410 598 ntBASIC9.15□□□□□ -0.94
Lmo4P61969 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.15□□□□□ -0.94
Lmo4P61969 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.15□□□□□ -0.94
Lmo4P61969 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC9.15□□□□□ -0.94
Lmo4P61969 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.15□□□□□ -0.94
Lmo4P61969 Gm10254-201ENSMUST00000052888 867 ntBASIC9.15□□□□□ -0.94
Lmo4P61969 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms