Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.03□□□□□ -0.8
Sec61a1P61620 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm5616-201ENSMUST00000165252 384 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm8741-201ENSMUST00000174736 384 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Mir5120-201ENSMUST00000175020 78 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm27552-201ENSMUST00000183351 62 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm27844-201ENSMUST00000183613 62 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Mir6979-201ENSMUST00000183927 56 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 AY036118-201ENSMUST00000200021 923 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm18730-201ENSMUST00000218038 343 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm807-202ENSMUST00000224929 408 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Sec61a1P61620 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.03□□□□□ -0.8
Sec61a1P61620 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Sec61a1P61620 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Sec61a1P61620 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Sec61a1P61620 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.02□□□□□ -0.8
Sec61a1P61620 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC10.02□□□□□ -0.8
Sec61a1P61620 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a1P61620 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.02□□□□□ -0.8
Sec61a1P61620 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.02□□□□□ -0.8
Sec61a1P61620 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Sec61a1P61620 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a1P61620 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.8
Sec61a1P61620 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.02□□□□□ -0.81
Sec61a1P61620 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm9136-201ENSMUST00000193368 454 ntBASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm43002-201ENSMUST00000200310 155 ntBASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm18753-201ENSMUST00000201000 566 ntBASIC10.02□□□□□ -0.81
Sec61a1P61620 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.02□□□□□ -0.81
Sec61a1P61620 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.02□□□□□ -0.81
Sec61a1P61620 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Sec61a1P61620 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms