Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC8.8□□□□□ -1
Ctdsp1P58466 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Gm39404-201ENSMUST00000216350 313 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Gm7441-201ENSMUST00000220697 1074 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 AC133598.3-202ENSMUST00000224219 531 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ctdsp1P58466 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Gm8131-201ENSMUST00000213783 1570 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 AC129931.1-201ENSMUST00000228865 1861 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.8□□□□□ -1
Ctdsp1P58466 Gm44445-201ENSMUST00000204075 2683 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 AC154176.2-201ENSMUST00000225376 6429 ntBASIC8.8□□□□□ -1
Ctdsp1P58466 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC8.8□□□□□ -1
Ctdsp1P58466 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ctdsp1P58466 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Ldlr-201ENSMUST00000034713 4627 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm37122-201ENSMUST00000195313 1567 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm43633-201ENSMUST00000202455 2330 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm8213-201ENSMUST00000118191 441 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Gm11500-201ENSMUST00000118237 601 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Ctdsp1P58466 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm6548-201ENSMUST00000167498 1165 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm22175-201ENSMUST00000175007 78 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC8.79□□□□□ -1
Ctdsp1P58466 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC8.79□□□□□ -1
Ctdsp1P58466 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm4857-201ENSMUST00000192718 785 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Gm38321-201ENSMUST00000195053 235 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Gm42588-201ENSMUST00000200538 1297 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
Ctdsp1P58466 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm15953-201ENSMUST00000117656 1732 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Gm37264-201ENSMUST00000194916 2192 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.79□□□□□ -1
Ctdsp1P58466 Gm16387-201ENSMUST00000180990 2632 ntBASIC8.79□□□□□ -1
Ctdsp1P58466 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms