Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Gm4654-201ENSMUST00000183305 982 ntBASIC13.68□□□□□ -0.22
Irf5P56477 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.68□□□□□ -0.22
Irf5P56477 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Irf5P56477 Gm43852-201ENSMUST00000202098 917 ntBASIC13.68□□□□□ -0.22
Irf5P56477 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.68□□□□□ -0.22
Irf5P56477 Gm14005-208ENSMUST00000223654 681 ntBASIC13.68□□□□□ -0.22
Irf5P56477 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.68□□□□□ -0.22
Irf5P56477 AC154595.1-201ENSMUST00000225533 1059 ntBASIC13.68□□□□□ -0.22
Irf5P56477 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.68□□□□□ -0.22
Irf5P56477 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Irf5P56477 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Irf5P56477 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Irf5P56477 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Irf5P56477 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Irf5P56477 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.67□□□□□ -0.22
Irf5P56477 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Irf5P56477 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Irf5P56477 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Irf5P56477 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.67□□□□□ -0.22
Irf5P56477 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Gm26047-201ENSMUST00000157308 113 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Gm22877-201ENSMUST00000175451 105 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Gm28439-201ENSMUST00000187714 876 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Gm17877-201ENSMUST00000192578 814 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Gm26047-202ENSMUST00000198840 115 ntBASIC13.67□□□□□ -0.22
Irf5P56477 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.67□□□□□ -0.22
Irf5P56477 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Gm19009-201ENSMUST00000223072 823 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Irf5P56477 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Irf5P56477 Gm26670-201ENSMUST00000180429 3287 ntBASIC13.67□□□□□ -0.22
Irf5P56477 AC140393.3-201ENSMUST00000228396 1352 ntBASIC13.67□□□□□ -0.22
Irf5P56477 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Irf5P56477 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Irf5P56477 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Irf5P56477 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Irf5P56477 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Gm26013-201ENSMUST00000104404 119 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Irf5P56477 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Irf5P56477 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Irf5P56477 Gm11801-201ENSMUST00000117807 746 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm14942-201ENSMUST00000119642 336 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm24844-201ENSMUST00000158679 127 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm12407-201ENSMUST00000180219 324 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.66□□□□□ -0.22
Irf5P56477 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm6450-201ENSMUST00000200896 574 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm44158-201ENSMUST00000203881 505 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC13.66□□□□□ -0.22
Irf5P56477 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.66□□□□□ -0.22
Irf5P56477 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.66□□□□□ -0.22
Irf5P56477 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Irf5P56477 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Irf5P56477 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Irf5P56477 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms