Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.22□□□□□ -0.61
Pdx1P52946 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pdx1P52946 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.21□□□□□ -0.61
Pdx1P52946 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.21□□□□□ -0.61
Pdx1P52946 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm14585-201ENSMUST00000120713 634 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm21778-201ENSMUST00000178779 471 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
Pdx1P52946 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm8959-201ENSMUST00000213150 571 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.21□□□□□ -0.61
Pdx1P52946 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Gm5451-201ENSMUST00000080545 579 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.21□□□□□ -0.61
Pdx1P52946 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pdx1P52946 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.21□□□□□ -0.62
Pdx1P52946 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.21□□□□□ -0.62
Pdx1P52946 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Pdx1P52946 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pdx1P52946 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Pdx1P52946 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.2□□□□□ -0.62
Pdx1P52946 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.2□□□□□ -0.62
Pdx1P52946 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.2□□□□□ -0.62
Pdx1P52946 Gm37458-201ENSMUST00000194055 410 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 Gm37905-201ENSMUST00000195310 341 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 Gm42997-202ENSMUST00000200321 985 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.2□□□□□ -0.62
Pdx1P52946 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pdx1P52946 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.2□□□□□ -0.62
Pdx1P52946 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms