Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shmt1P50431 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt1P50431 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shmt1P50431 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Shmt1P50431 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Shmt1P50431 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shmt1P50431 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm25766-201ENSMUST00000104101 131 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Gm24398-201ENSMUST00000157870 109 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.99□□□□□ -0.49
Shmt1P50431 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Gm29155-201ENSMUST00000185910 269 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.99□□□□□ -0.49
Shmt1P50431 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm18561-201ENSMUST00000206027 804 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.99□□□□□ -0.49
Shmt1P50431 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Shmt1P50431 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.99□□□□□ -0.49
Shmt1P50431 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.99□□□□□ -0.49
Shmt1P50431 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Shmt1P50431 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt1P50431 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.98□□□□□ -0.49
Shmt1P50431 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.98□□□□□ -0.49
Shmt1P50431 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Shmt1P50431 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.98□□□□□ -0.49
Shmt1P50431 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.98□□□□□ -0.49
Shmt1P50431 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm37028-201ENSMUST00000194276 107 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Gm44323-201ENSMUST00000198689 129 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Shmt1P50431 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm30671-201ENSMUST00000214898 318 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Shmt1P50431 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms