Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.6□□□□□ -0.71
Sox2P48432 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Sox2P48432 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.6□□□□□ -0.71
Sox2P48432 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.6□□□□□ -0.71
Sox2P48432 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.6□□□□□ -0.71
Sox2P48432 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC10.6□□□□□ -0.71
Sox2P48432 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.6□□□□□ -0.71
Sox2P48432 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Gm8885-201ENSMUST00000189382 598 ntBASIC10.6□□□□□ -0.71
Sox2P48432 Gm6621-201ENSMUST00000193251 772 ntBASIC10.6□□□□□ -0.71
Sox2P48432 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.6□□□□□ -0.71
Sox2P48432 Gm18935-201ENSMUST00000212692 664 ntBASIC10.6□□□□□ -0.71
Sox2P48432 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.6□□□□□ -0.71
Sox2P48432 Gm9797-202ENSMUST00000218003 294 ntBASIC10.6□□□□□ -0.71
Sox2P48432 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.6□□□□□ -0.71
Sox2P48432 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox2P48432 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Sox2P48432 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox2P48432 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.6□□□□□ -0.71
Sox2P48432 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Sox2P48432 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.6□□□□□ -0.71
Sox2P48432 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Sox2P48432 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.6□□□□□ -0.71
Sox2P48432 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Sox2P48432 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Sox2P48432 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sox2P48432 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.59□□□□□ -0.71
Sox2P48432 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.59□□□□□ -0.71
Sox2P48432 Gm14726-201ENSMUST00000120623 896 ntBASIC10.59□□□□□ -0.71
Sox2P48432 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.59□□□□□ -0.71
Sox2P48432 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.59□□□□□ -0.71
Sox2P48432 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.59□□□□□ -0.71
Sox2P48432 Gm2991-201ENSMUST00000173338 480 ntBASIC10.59□□□□□ -0.71
Sox2P48432 Gm20495-201ENSMUST00000173902 235 ntBASIC10.59□□□□□ -0.71
Sox2P48432 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sox2P48432 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox2P48432 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.59□□□□□ -0.71
Sox2P48432 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox2P48432 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Sox2P48432 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox2P48432 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox2P48432 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox2P48432 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox2P48432 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Sox2P48432 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox2P48432 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.58□□□□□ -0.72
Sox2P48432 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox2P48432 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox2P48432 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms