Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Mir6979-201ENSMUST00000183927 56 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.4□□□□□ -0.74
Nkx2-2P42586 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx2-2P42586 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-2P42586 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.4□□□□□ -0.75
Nkx2-2P42586 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.4□□□□□ -0.75
Nkx2-2P42586 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Nkx2-2P42586 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm13611-201ENSMUST00000118269 318 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm16166-201ENSMUST00000118291 787 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm24992-201ENSMUST00000157412 130 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Mir7051-201ENSMUST00000184167 73 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm45398-201ENSMUST00000210561 165 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm5468-202ENSMUST00000227851 682 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.39□□□□□ -0.75
Nkx2-2P42586 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx2-2P42586 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.38□□□□□ -0.75
Nkx2-2P42586 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms