Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.42□□□□□ -0.58
Fen1P39749 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Fen1P39749 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.42□□□□□ -0.58
Fen1P39749 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.42□□□□□ -0.58
Fen1P39749 Gm16570-201ENSMUST00000161951 436 ntBASIC11.42□□□□□ -0.58
Fen1P39749 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Fen1P39749 Gm5070-201ENSMUST00000177599 862 ntBASIC11.42□□□□□ -0.58
Fen1P39749 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.42□□□□□ -0.58
Fen1P39749 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Fen1P39749 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.42□□□□□ -0.58
Fen1P39749 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fen1P39749 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fen1P39749 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Fen1P39749 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Fen1P39749 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
Fen1P39749 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Fen1P39749 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.41□□□□□ -0.58
Fen1P39749 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.41□□□□□ -0.58
Fen1P39749 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gm25668-201ENSMUST00000157700 129 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.41□□□□□ -0.58
Fen1P39749 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gm29199-201ENSMUST00000187766 775 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.41□□□□□ -0.58
Fen1P39749 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gm30285-201ENSMUST00000214614 422 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Gm6082-201ENSMUST00000215204 454 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.41□□□□□ -0.58
Fen1P39749 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.41□□□□□ -0.58
Fen1P39749 Gzmn-202ENSMUST00000225535 989 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Fen1P39749 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.41□□□□□ -0.58
Fen1P39749 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.41□□□□□ -0.58
Fen1P39749 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Fen1P39749 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Fen1P39749 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Fen1P39749 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Fen1P39749 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms