Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Rom1P32958 Gm45199-201ENSMUST00000207640 1507 ntBASIC8.96□□□□□ -0.97
Rom1P32958 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC8.96□□□□□ -0.97
Rom1P32958 AC153506.1-201ENSMUST00000218768 2915 ntBASIC8.96□□□□□ -0.97
Rom1P32958 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Rom1P32958 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rom1P32958 Spata33-207ENSMUST00000212760 4074 ntBASIC8.96□□□□□ -0.97
Rom1P32958 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Rom1P32958 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC8.96□□□□□ -0.98
Rom1P32958 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC8.96□□□□□ -0.98
Rom1P32958 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.96□□□□□ -0.98
Rom1P32958 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Gm25226-201ENSMUST00000158198 123 ntBASIC8.96□□□□□ -0.98
Rom1P32958 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Rom1P32958 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rom1P32958 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Gm43118-201ENSMUST00000199149 775 ntBASIC8.96□□□□□ -0.98
Rom1P32958 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC8.96□□□□□ -0.98
Rom1P32958 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC8.96□□□□□ -0.98
Rom1P32958 Gm42867-201ENSMUST00000202995 469 ntBASIC8.96□□□□□ -0.98
Rom1P32958 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Gm5626-201ENSMUST00000222151 1058 ntBASIC8.96□□□□□ -0.98
Rom1P32958 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.96□□□□□ -0.98
Rom1P32958 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Gm5455-201ENSMUST00000058710 715 ntBASIC8.96□□□□□ -0.98
Rom1P32958 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC8.96□□□□□ -0.98
Rom1P32958 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Rom1P32958 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC8.96□□□□□ -0.98
Rom1P32958 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Rom1P32958 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC8.96□□□□□ -0.98
Rom1P32958 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC8.96□□□□□ -0.98
Rom1P32958 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Gm44573-201ENSMUST00000191753 2370 ntBASIC8.95□□□□□ -0.98
Rom1P32958 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Rom1P32958 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC8.95□□□□□ -0.98
Rom1P32958 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC8.95□□□□□ -0.98
Rom1P32958 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC8.95□□□□□ -0.98
Rom1P32958 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Gm6981-201ENSMUST00000182467 1008 ntBASIC8.95□□□□□ -0.98
Rom1P32958 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Gm5950-201ENSMUST00000213337 772 ntBASIC8.95□□□□□ -0.98
Rom1P32958 Gm5035-201ENSMUST00000215581 927 ntBASIC8.95□□□□□ -0.98
Rom1P32958 AC153954.1-201ENSMUST00000216959 255 ntBASIC8.95□□□□□ -0.98
Rom1P32958 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Rom1P32958 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Rom1P32958 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Rom1P32958 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms